STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prmA[LSU ribosomal protein L11P]-lysine N-methyltransferase; IMG locus_tag: Ga0114326_111006. (289 aa)    
Predicted Functional Partners:
rplK
LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
 
 0.950
AQX30934.1
Xaa-Pro aminopeptidase; IMG locus_tag: Ga0114326_111007.
       0.780
AQX30932.1
Protein SCO1/2; IMG locus_tag: Ga0114326_111005.
       0.723
AQX30228.1
16S rRNA (uracil1498-N3)-methyltransferase; IMG locus_tag: Ga0114326_11275.
  
  
 0.719
AQX30229.1
16S rRNA (uracil1498-N3)-methyltransferase; IMG locus_tag: Ga0114326_11276.
  
  
 0.719
dnaJ
Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]
  
  
 0.706
dnaJ-2
DnaJ-class molecular chaperone with C-terminal Zn finger domain; IMG locus_tag: Ga0114326_11385.
  
  
 0.706
AQX31436.1
DnaJ domain-containing protein; IMG locus_tag: Ga0114326_111533.
  
  
 0.706
rlmH
23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
 
   
 0.556
pheT
phenylalanyl-tRNA synthetase beta subunit; IMG locus_tag: Ga0114326_1179; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
  
 0.522
Your Current Organism:
Bartonella schoenbuchensis
NCBI taxonomy Id: 687861
Other names: B. schoenbuchensis R1, Bartonella schoenbuchensis R1, Bartonella schoenbuchensis str. R1, Bartonella schoenbuchensis strain R1, Bartonella sp. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.