STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCH22596.1Methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (295 aa)    
Predicted Functional Partners:
OCH22595.1
Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.945
OCH22594.1
Type IV-A pilus assembly ATPase PilB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.933
OCH22593.1
Pilin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N-Me-Phe pilin family.
 
  
 0.903
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.893
OCH20213.1
MSHA biogenesis protein MshE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.878
OCH18414.1
Type II secretion system protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.878
OCH20214.1
MSHA biogenesis protein MshG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.876
OCH18415.1
Type II secretion system protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.875
OCH20280.1
Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.861
OCH20281.1
Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.835
Your Current Organism:
Aliivibrio logei
NCBI taxonomy Id: 688
Other names: A. logei, ATCC 29985, CCUG 20283, CIP 104991, LMG 21012, LMG:21012, NCIMB 2252, Photobacterium logei, Vibrio logei, strain 584
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.