Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OCH17546.1 | OCH17547.1 | A6E04_18110 | A6E04_18115 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.595 |
| OCH17546.1 | apt | A6E04_18110 | A6E04_18120 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.468 |
| OCH17547.1 | OCH17546.1 | A6E04_18115 | A6E04_18110 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.595 |
| OCH17547.1 | OCH21806.1 | A6E04_18115 | A6E04_08060 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| OCH17547.1 | OCH22241.1 | A6E04_18115 | A6E04_10380 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thiol reductant ABC exporter subunit CydD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
| OCH17547.1 | OCH22242.1 | A6E04_18115 | A6E04_10385 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.677 |
| OCH17547.1 | apt | A6E04_18115 | A6E04_18120 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.600 |
| OCH17547.1 | dnaX | A6E04_18115 | A6E04_18125 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.454 |
| OCH21806.1 | OCH17547.1 | A6E04_08060 | A6E04_18115 | Cytochrome biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| OCH22241.1 | OCH17547.1 | A6E04_10380 | A6E04_18115 | Thiol reductant ABC exporter subunit CydD; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
| OCH22241.1 | OCH22242.1 | A6E04_10380 | A6E04_10385 | Thiol reductant ABC exporter subunit CydD; Derived by automated computational analysis using gene prediction method: Protein Homology. | In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| OCH22242.1 | OCH17547.1 | A6E04_10385 | A6E04_18115 | In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.677 |
| OCH22242.1 | OCH22241.1 | A6E04_10385 | A6E04_10380 | In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thiol reductant ABC exporter subunit CydD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| apt | OCH17546.1 | A6E04_18120 | A6E04_18110 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.468 |
| apt | OCH17547.1 | A6E04_18120 | A6E04_18115 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.600 |
| apt | dnaX | A6E04_18120 | A6E04_18125 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.592 |
| dnaX | OCH17547.1 | A6E04_18125 | A6E04_18115 | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.454 |
| dnaX | apt | A6E04_18125 | A6E04_18120 | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.592 |