STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570545_06042Unannotated protein. (352 aa)    
Predicted Functional Partners:
GCA_001570545_06041
Unannotated protein.
 
  
  0.952
GCA_001570545_06032
Unannotated protein.
 
 
 0.888
GCA_001570545_06033
Unannotated protein.
 
 0.881
GCA_001570545_06034
Unannotated protein.
 
     0.855
GCA_001570545_06043
Unannotated protein.
 
 
   0.819
GCA_001570545_06044
Unannotated protein.
 
     0.814
GCA_001570545_02052
Unannotated protein.
 
 0.808
GCA_001570545_02053
Unannotated protein.
 
  
  0.785
GCA_001570545_05504
Unannotated protein.
 
 
  0.774
GCA_001570545_03227
Unannotated protein.
    
 0.773
Your Current Organism:
Herbidospora mongoliensis
NCBI taxonomy Id: 688067
Other names: H. mongoliensis, Herbidospora mongoliensis Ara et al. 2012, Herbidospora sp. MN08-A0118, NBRC 105882, VTCC D9-22, strain MN08-A0118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.