STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570545_07383Unannotated protein. (260 aa)    
Predicted Functional Partners:
GCA_001570545_07824
Unannotated protein.
  
 0.998
GCA_001570545_07382
Unannotated protein.
  
 0.970
GCA_001570545_03328
Unannotated protein.
  
 
 0.918
GCA_001570545_01630
Unannotated protein.
     
 0.899
GCA_001570545_05665
Unannotated protein.
    
 0.897
GCA_001570545_00016
Unannotated protein.
    
0.813
GCA_001570545_02307
Unannotated protein.
 
  
 0.707
GCA_001570545_01556
Unannotated protein.
    
 0.661
GCA_001570545_07828
Unannotated protein.
    
 0.653
GCA_001570545_02333
Unannotated protein.
    
 0.645
Your Current Organism:
Herbidospora mongoliensis
NCBI taxonomy Id: 688067
Other names: H. mongoliensis, Herbidospora mongoliensis Ara et al. 2012, Herbidospora sp. MN08-A0118, NBRC 105882, VTCC D9-22, strain MN08-A0118
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.