STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACY31150.1Conserved hypothetical protein; COG0045, SucC, Succinyl-CoA synthetase. (119 aa)    
Predicted Functional Partners:
ACY32260.1
Proline sensor PrlS; COG3614, Predicted periplasmic ligand-binding sensordomain.
  
 0.905
ACY32266.1
Diguanylate cyclase/phosphodiesterase with; COG2199, FOG: GGDEF domain.
  
 0.905
ACY33330.1
Virulence sensor protein BvgS; COG4623, Predicted soluble lytic transglycosylase fused toan ABC-type amino acid-binding protein.
  
 0.865
ACY33271.1
Diguanylate cyclase/phosphodiesterase; COG3300, MHYT domain (predicted integral membrane sensordomain).
 
 0.855
ACY31148.1
COG2229, Predicted GTPase.
 
     0.821
ACY33074.1
Putative PAS/PAC sensor protein; COG3300, MHYT domain (predicted integral membrane sensordomain).
  
 0.806
ACY34431.1
Diguanylate cyclase with PAS/PAC sensor; COG2199, FOG: GGDEF domain.
  
 0.793
ACY32915.1
PAS/PAC sensor hybrid histidine kinase; COG0642, BaeS, Signal transduction histidine kinase.
  
 0.776
ACY33688.1
PAS/PAC sensor hybrid histidine kinase; COG4191, Signal transduction histidine kinase regulatingC4-dicarboxylate transport system.
  
 0.776
ACY34731.1
COG0643, CheA, Chemotaxis protein histidine kinase and related kinases.
  
 0.728
Your Current Organism:
Comamonas testosteroni
NCBI taxonomy Id: 688245
Other names: C. testosteroni CNB-2, Comamonas testosteroni CNB-2, Comamonas testosteroni str. CNB-2, Comamonas testosteroni strain CNB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.