STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACY31784.1Putative amino acid metabolite efflux pump; COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT)superfamily. (297 aa)    
Predicted Functional Partners:
ACY31785.1
COG4977, Transcriptional regulator containing an amidasedomain and an AraC-type DNA-binding HTH domain.
 
     0.780
ACY32138.1
Twin-arginine translocation pathway signal; COG2113, ProX, ABC-type proline/glycine betaine transport systems.
  
  
  0.411
ACY32139.1
Substrate-binding region of ABC-type glycine; COG2113, ProX, ABC-type proline/glycine betaine transport systems.
  
  
  0.408
Your Current Organism:
Comamonas testosteroni
NCBI taxonomy Id: 688245
Other names: C. testosteroni CNB-2, Comamonas testosteroni CNB-2, Comamonas testosteroni str. CNB-2, Comamonas testosteroni strain CNB-2
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