STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACY33043.1COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII. (530 aa)    
Predicted Functional Partners:
ACY35184.1
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
    
  0.801
ACY35252.1
Ferredoxin; COG2124, CypX, Cytochrome P450.
  
 0.784
ACY33496.1
COG2124, CypX, Cytochrome P450.
   
 0.755
ACY33047.1
acyl-CoA dehydrogenase-like protein; COG1062, AdhC, Zn-dependent alcohol dehydrogenases.
  
 
  0.754
ACY35199.1
Phosphoesterase; COG0671, PgpB, Membrane-associated phospholipid phosphatase.
    
 0.732
ACY35369.1
Phosphoesterase, PA-phosphatase related protein; COG3907, PAP2 (acid phosphatase) superfamily protein.
    
  0.732
ACY35371.1
Phosphoesterase; COG0671, PgpB, Membrane-associated phospholipid phosphatase.
    
  0.732
ACY33044.1
COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.677
ACY33638.1
acyl-CoA dehydrogenase-like protein; COG1960, CaiA, Acyl-CoA dehydrogenases.
  
 
  0.656
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.622
Your Current Organism:
Comamonas testosteroni
NCBI taxonomy Id: 688245
Other names: C. testosteroni CNB-2, Comamonas testosteroni CNB-2, Comamonas testosteroni str. CNB-2, Comamonas testosteroni strain CNB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.