STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGN55583.1Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: bth:BT_0222 two-component system sensor; PFAM: Signal transduction histidine kinase, internal region; SPTR: Putative two-component system sensor kinase; IMG reference gene:2503874092; PFAM: Histidine kinase. (360 aa)    
Predicted Functional Partners:
EGN55582.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: bth:BT_0223 two-component system response regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system response regulator; IMG reference gene:2503874091; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
 
 0.966
EGN55707.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: cpi:Cpin_6102 two component transcriptional regulator, LytTR family; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Putative response regulator; IMG reference gene:2503874230; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
 
 0.859
EGN56026.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: bth:BT_0223 two-component system response regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two component system response regulator; IMG reference gene:2503874576; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
 
 0.859
EGN56117.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: dfe:Dfer_0804 two component transcriptional regulator, LytTR family; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; IMG reference gene:2503874672; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
 
 0.859
EGN57889.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fjo:Fjoh_3229 LytTR family two component transcriptional regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; IMG reference gene:2503876602; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
 
 0.859
EGN56099.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: bth:BT_0223 two-component system response regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system response regulator; IMG reference gene:2503874651; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
 
 0.856
EGN55584.1
KEGG: bfr:BF3279 hypothetical protein; SPTR: Putative membrane protein; manually curated; IMG reference gene:2503874093.
       0.718
EGN55585.1
Membrane bound O-acyl transferase MBOAT family protein; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: bfr:BF3278 membrane-bound O-acyltransferase; PFAM: Membrane bound O-acyl transferase, MBOAT; SPTR: Alginate O-acetyltransferase AlgI; IMG reference gene:2503874094; PFAM: MBOAT family; Belongs to the membrane-bound acyltransferase family.
       0.718
EGN55586.1
KEGG: bfs:BF3116 putative acyl carrier protein; SPTR: Acyl carrier protein; IMG reference gene:2503874095; PFAM: Phosphopantetheine attachment site.
       0.676
EGN55587.1
Phenylalanine racemase (ATP-hydrolyzing); COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR000873; KEGG: bfr:BF3276 putative peptide synthetase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Phenylalanine racemase (ATP-hydrolyzing); SPTR: Enterobactin synthetase component F-related protein; IMG reference gene:2503874096; PFAM: AMP-binding enzyme; TIGRFAM: amino acid adenylation domain.
       0.658
Your Current Organism:
Prevotella multisaccharivorax
NCBI taxonomy Id: 688246
Other names: P. multisaccharivorax DSM 17128, Prevotella multisaccharivorax DSM 17128, Prevotella multisaccharivorax JCM 12954, Prevotella multisaccharivorax str. DSM 17128, Prevotella multisaccharivorax strain DSM 17128
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