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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGN55686.1Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: pmz:HMPREF0659_A5401 permease, YjgP/YjgQ family; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative uncharacterized protein; IMG reference gene:2503874209; PFAM: Predicted permease YjgP/YjgQ family. (645 aa)    
Predicted Functional Partners:
EGN56396.1
Sulfate-transporting ATPase; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: pmz:HMPREF0659_A6183 lipopolysaccharide ABC transporter, ATP-binding protein LptB; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Lipopolysaccharide ABC superfamily ATP binding cassette transporter, ABC protein; IMG reference gene:2503874982; PFAM: ABC transporter.
 
 
 0.983
EGN57081.1
Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: pmz:HMPREF0659_A5592 permease, YjgP/YjgQ family; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative membrane protein; IMG reference gene:2503875721; PFAM: Predicted permease YjgP/YjgQ family.
 
 
  0.965
EGN58104.1
Hypothetical protein; COGs: COG1452 Organic solvent tolerance protein OstA; KEGG: pmz:HMPREF0659_A5994 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503876831.
 
 
 0.843
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.817
EGN58026.1
KEGG: pru:PRU_1810 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503876747; PFAM: Protein of unknown function (DUF2723).
  
     0.748
EGN57832.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: pmz:HMPREF0659_A6366 outer membrane protein, OMP85 family; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Putative uncharacterized protein; IMG reference gene:2503876533; PFAM: Surface antigen variable number repeat; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
 
     0.735
EGN56257.1
KEGG: pmz:HMPREF0659_A5034 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503874826.
  
     0.707
EGN58141.1
Outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: pmz:HMPREF0659_A7125 outer membrane assembly lipoprotein YfiO; SPTR: Putative uncharacterized protein; TIGRFAM: Outer membrane assembly lipoprotein YfiO; manually curated; IMG reference gene:2503876873; TIGRFAM: outer membrane assembly lipoprotein YfiO.
  
   
 0.696
EGN56650.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: pmz:HMPREF0659_A6788 outer membrane protein, OMP85 family; PFAM: Bacterial surface antigen (D15); SPTR: Outer membrane protein, OMP85 family; IMG reference gene:2503875262; PFAM: Surface antigen.
 
     0.689
EGN57953.1
Protein of unknown function DUF164; COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: pmz:HMPREF0659_A5990 zinc ribbon domain protein; PFAM: Protein of unknown function DUF164; SPTR: Putative uncharacterized protein; IMG reference gene:2503876670; PFAM: Putative zinc ribbon domain.
  
     0.676
Your Current Organism:
Prevotella multisaccharivorax
NCBI taxonomy Id: 688246
Other names: P. multisaccharivorax DSM 17128, Prevotella multisaccharivorax DSM 17128, Prevotella multisaccharivorax JCM 12954, Prevotella multisaccharivorax str. DSM 17128, Prevotella multisaccharivorax strain DSM 17128
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