Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGN55984.1FeS assembly ATPase SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR010230:IPR003439; KEGG: pmz:HMPREF0659_A5174 FeS assembly ATPase SufC; PFAM: ABC transporter-like; SPTR: FeS assembly ATPase SufC; TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; IMG reference gene:2503874528; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC. (254 aa)    
Predicted Functional Partners:
EGN55983.1
Iron-regulated ABC transporter membrane component SufB; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR010231:IPR000825; KEGG: pmz:HMPREF0659_A5172 FeS assembly protein SufB; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; IMG reference gene:2503874527; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
 
 0.998
EGN55985.1
FeS assembly protein SufD; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR011542:IPR000825; KEGG: pmz:HMPREF0659_A5175 FeS assembly protein SufD; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: Fe-S cluster assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; IMG reference gene:2503874529; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD.
 
 
 0.995
EGN55986.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.993
rnhB
RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.715
EGN56215.1
COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: bth:BT_2547 hypothetical protein; PFAM: Fe-S metabolism associated SufE; SPTR: Fe-S metabolism associated domain subfamily; IMG reference gene:2503874784; PFAM: Fe-S metabolism associated domain.
 
 
 0.693
EGN56292.1
Protein of unknown function DUF59; COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: pru:PRU_2252 hypothetical protein; PFAM: Domain of unknown function DUF59; SPTR: FeS assembly SUF system protein; IMG reference gene:2503874864; PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein.
 
  
 0.673
EGN55988.1
Hypothetical protein; COGs: COG2378 transcriptional regulator protein; KEGG: pmz:HMPREF0659_A5182 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503874532.
       0.648
infB
Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
  
 0.545
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
       0.510
rimP
Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
       0.493
Your Current Organism:
Prevotella multisaccharivorax
NCBI taxonomy Id: 688246
Other names: P. multisaccharivorax DSM 17128, Prevotella multisaccharivorax DSM 17128, Prevotella multisaccharivorax JCM 12954, Prevotella multisaccharivorax str. DSM 17128, Prevotella multisaccharivorax strain DSM 17128
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.