Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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EGN56263.1InterPro IPR005543; KEGG: pmz:HMPREF0659_A6207 PASTA domain protein; PFAM: PASTA; SMART: PASTA; SPTR: Putative uncharacterized protein; IMG reference gene:2503874833; PFAM: PASTA domain. (238 aa)    
Predicted Functional Partners:
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
    
 0.857
EGN56262.1
Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
  
    0.815
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 
 0.769
EGN56666.1
Forkhead-associated protein; InterPro IPR000253; KEGG: pru:PRU_1315 FHA domain-containing protein; PFAM: Forkhead-associated (FHA) domain; SPTR: FHA domain protein; IMG reference gene:2503875278; PFAM: FHA domain.
   
 
 0.754
EGN57391.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
 
 0.753
EGN56543.1
KEGG: pmz:HMPREF0659_A6700 hypothetical protein; SPTR: Peptidyl-prolyl cis-trans isomerase; IMG reference gene:2503875141.
  
     0.701
EGN58026.1
KEGG: pru:PRU_1810 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503876747; PFAM: Protein of unknown function (DUF2723).
  
     0.697
EGN58058.1
Protein of unknown function DUF490; COGs: COG2911 conserved hypothetical protein; InterPro IPR007452; KEGG: pmz:HMPREF0659_A6499 hypothetical protein; PFAM: Protein of unknown function DUF490; SPTR: Putative uncharacterized protein; IMG reference gene:2503876780.
 
     0.645
rpmH
LSU ribosomal protein L34P; InterPro IPR000271; KEGG: pru:PRU_2238 50S ribosomal protein L34; PFAM: Ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; IMG reference gene:2503874834; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family.
     
 0.613
EGN56650.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: pmz:HMPREF0659_A6788 outer membrane protein, OMP85 family; PFAM: Bacterial surface antigen (D15); SPTR: Outer membrane protein, OMP85 family; IMG reference gene:2503875262; PFAM: Surface antigen.
  
     0.598
Your Current Organism:
Prevotella multisaccharivorax
NCBI taxonomy Id: 688246
Other names: P. multisaccharivorax DSM 17128, Prevotella multisaccharivorax DSM 17128, Prevotella multisaccharivorax JCM 12954, Prevotella multisaccharivorax str. DSM 17128, Prevotella multisaccharivorax strain DSM 17128
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