STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
EGN56449.1TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: pmz:HMPREF0659_A5491 TonB-dependent receptor plug domain protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug domain protein; IMG reference gene:2503875045; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family. (1160 aa)    
Predicted Functional Partners:
EGN56448.1
RagB/SusD domain-containing protein; InterPro IPR012944; KEGG: pmz:HMPREF0659_A5492 SusD family protein; PFAM: RagB/SusD; SPTR: SusD family protein; IMG reference gene:2503875044; PFAM: SusD family.
 
 
   0.967
EGN57665.1
RagB/SusD domain-containing protein; InterPro IPR012944; KEGG: bth:BT_3280 hypothetical protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2503876345; PFAM: SusD family.
  
 
   0.820
EGN56837.1
KEGG: pmz:HMPREF0659_A5440 hypothetical protein; SPTR: Lipoprotein; IMG reference gene:2503875454; PFAM: SusD family.
  
 
   0.814
EGN56391.1
InterPro IPR012944; KEGG: phe:Phep_3634 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2503874975; PFAM: SusD family.
  
 
   0.764
EGN56332.1
RagB/SusD domain-containing protein; InterPro IPR012944; KEGG: bfs:BF2941 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative lipoprotein; IMG reference gene:2503874904; PFAM: SusD family.
  
 
   0.748
EGN56447.1
KEGG: pmz:HMPREF0659_A5493 putative lipoprotein; SPTR: Fasciclin domain protein; IMG reference gene:2503875043.
       0.741
EGN58201.1
RagB/SusD domain-containing protein; InterPro IPR012944; KEGG: bfs:BF2941 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein; IMG reference gene:2503876936; PFAM: SusD family.
  
 
   0.741
EGN56317.1
Hypothetical protein; KEGG: fjo:Fjoh_3801 RagB/SusD domain-containing protein; SPTR: RagB/SusD domain protein; IMG reference gene:2503874889; PFAM: SusD family; TIGRFAM: pentatricopeptide repeat domain (PPR motif).
  
 
   0.738
EGN55802.1
RagB/SusD domain-containing protein; InterPro IPR012944; KEGG: pdi:BDI_3134 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein; IMG reference gene:2503874332; PFAM: SusD family.
  
 
   0.731
EGN57234.1
InterPro IPR012944; KEGG: dfe:Dfer_4737 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein; IMG reference gene:2503875879; PFAM: SusD family.
  
 
   0.730
Your Current Organism:
Prevotella multisaccharivorax
NCBI taxonomy Id: 688246
Other names: P. multisaccharivorax DSM 17128, Prevotella multisaccharivorax DSM 17128, Prevotella multisaccharivorax JCM 12954, Prevotella multisaccharivorax str. DSM 17128, Prevotella multisaccharivorax strain DSM 17128
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.