Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EGN56929.1KEGG: pmz:HMPREF0659_A5740 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503875559. (158 aa)    
Predicted Functional Partners:
EGN56930.1
Hypothetical protein; KEGG: atu:Atu3957 ABC transporter, substrate binding protein (glycine-betaine); SPTR: Putative uncharacterized protein; IMG reference gene:2503875560.
       0.718
EGN56928.1
COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: bfr:BFp0034 DNA binding protein HU; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: DNA-binding protein HU; IMG reference gene:2503875558; PFAM: Bacterial DNA-binding protein.
       0.682
EGN56927.1
KEGG: pmz:HMPREF0659_A5739 hypothetical protein; SPTR: Topoisomerase DNA-binding C4 zinc finger domain protein; IMG reference gene:2503875557.
       0.498
Your Current Organism:
Prevotella multisaccharivorax
NCBI taxonomy Id: 688246
Other names: P. multisaccharivorax DSM 17128, Prevotella multisaccharivorax DSM 17128, Prevotella multisaccharivorax JCM 12954, Prevotella multisaccharivorax str. DSM 17128, Prevotella multisaccharivorax strain DSM 17128
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