Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
EGN57488.1KEGG: bvu:BVU_3369 conjugate transposon protein TraE; SPTR: Putative uncharacterized protein; IMG reference gene:2503876153. (94 aa)    
Predicted Functional Partners:
EGN57486.1
KEGG: pdi:BDI_2546 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503876151.
       0.435
EGN57487.1
KEGG: sha:SH0040 hypothetical protein; SPTR: Similar to surface protein SdrI from Staphylococcus saprophyticus; IMG reference gene:2503876152.
       0.435
Your Current Organism:
Prevotella multisaccharivorax
NCBI taxonomy Id: 688246
Other names: P. multisaccharivorax DSM 17128, Prevotella multisaccharivorax DSM 17128, Prevotella multisaccharivorax JCM 12954, Prevotella multisaccharivorax str. DSM 17128, Prevotella multisaccharivorax strain DSM 17128
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