STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV48680.1KEGG: fjo:Fjoh_4626 hypothetical protein; SPTR: Putative uncharacterized protein. (196 aa)    
Predicted Functional Partners:
ADV48679.1
COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR012748; IPR017941; KEGG: fjo:Fjoh_4625 nitrite reductase (NAD(P)H), small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Nitrite reductase (NAD(P)H) large subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit.
 
   
 0.823
ADV48681.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; IPR000014; IPR013656; IPR011712; KEGG: fjo:Fjoh_4627 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; PAS fold-4; SMART: ATPase-like, ATP-binding domain; SPTR: Putative uncharacterized protein; TIGRFAM: PAS; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box.
 
 
   0.759
ADV48678.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; COGs: COG1251 NAD(P)H-nitrite reductase; InterProIPR012744; IPR013027; IPR007419; IPR005117; IPR 006067; KEGG: fjo:Fjoh_4624 nitrite reductase (NAD(P)H), large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Nitrite/sulphite reductase 4Fe-4S domain; PRIAM: Nitrite reductase (NAD(P)H); SPTR: Putative NAD(P)H-nitrite reductase, large subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subun [...]
 
     0.700
ADV48682.1
KEGG: rbi:RB2501_01196 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.659
ADV48667.1
InterPro IPR004039; KEGG: fjo:Fjoh_4634 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin.
 
     0.528
ADV48676.1
Major facilitator superfamily MFS_1; COGs: COG2223 Nitrate/nitrite transporter; InterPro IPR011701; KEGG: lbf:LBF_2686 nitrate/nitrite transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Probable high affinity nitrate transporter transmembrane protein; PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator).
 
   
 0.505
ADV48677.1
COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366; IPR000878; KEGG: sli:Slin_5405 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Uroporphyrinogen-III C-methyltransferase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
       0.434
ADV48675.1
KEGG: fbc:FB2170_14903 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.423
ADV51145.1
KEGG: hau:Haur_4538 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.409
ADV48184.1
Xylan 1,4-beta-xylosidase; InterPro IPR006710; KEGG: fjo:Fjoh_1998 alpha-N-arabinofuranosidase; PFAM: Glycoside hydrolase, family 43; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Glycoside hydrolase family 43 domain protein; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.403
Your Current Organism:
Cellulophaga algicola
NCBI taxonomy Id: 688270
Other names: C. algicola DSM 14237, Cellulophaga algicola DSM 14237, Cellulophaga algicola IC166, Cellulophaga algicola str. DSM 14237, Cellulophaga algicola strain DSM 14237
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