STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV50302.1COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_14468 putative universal stress protein UspA; PFAM: UspA; SPTR: Putative universal stress protein UspA; PFAM: Universal stress protein family. (278 aa)    
Predicted Functional Partners:
ADV50301.1
UspA domain-containing protein; InterPro IPR006016; KEGG: fbc:FB2170_14463 putative universal stress protein UspA; PFAM: UspA; SPTR: Putative universal stress protein UspA; PFAM: Universal stress protein family.
 
    
0.773
ADV50300.1
COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: gfo:GFO_0733 universal stress protein family protein; PFAM: UspA; SPTR: Universal stress protein; PFAM: Universal stress protein family.
 
    
0.611
ADV50303.1
Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766; IPR005746; KEGG: fbc:FB2170_14483 thioredoxin C-2; PFAM: Thioredoxin domain; SPTR: Thioredoxin C-2; TIGRFAM: Thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin.
  
   0.573
ADV50308.1
PAS/PAC sensor signal transduction histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR000014; IPR001610; IPR003661; IPR003594; IPR 013767; KEGG: fbc:FB2170_14498 sensory transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif; SPTR: Signal transduction histidine kinase; TIGRFAM: PAS; PFAM: Histidine kin [...]
  
   
 0.573
ADV50299.1
COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_12062 hypothetical protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Putative uncharacterized protein; PFAM: Mechanosensitive ion channel; Sodium/hydrogen exchanger family.
 
     0.549
ADV50307.1
Transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR001789; IPR000595; IPR001808; KEGG: zpr:ZPR_2015 putative diguanylate phosphodiesterase (EAL domain) with response regulator receiver modulation; PFAM: Signal transduction response regulator, receiver domain; Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Signal transduction response regulator, receiver domain; Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SPTR [...]
 
  
 0.455
Your Current Organism:
Cellulophaga algicola
NCBI taxonomy Id: 688270
Other names: C. algicola DSM 14237, Cellulophaga algicola DSM 14237, Cellulophaga algicola IC166, Cellulophaga algicola str. DSM 14237, Cellulophaga algicola strain DSM 14237
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