STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC38698.1Dipeptidyl aminopeptidase/acylaminoacyl peptidase. (665 aa)    
Predicted Functional Partners:
SKC88994.1
CubicO group peptidase, beta-lactamase class C family.
 
     0.915
SKC81831.1
CubicO group peptidase, beta-lactamase class C family.
 
     0.873
SKC79076.1
Beta-lactamase class C.
 
     0.867
SKC40942.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
 
  0.722
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.720
SKC38687.1
4a-hydroxytetrahydrobiopterin dehydratase.
       0.636
SKC38704.1
Hypothetical protein.
       0.492
rsmI
16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.468
SKC61326.1
Protein of unknown function.
  
     0.440
SKC38659.1
Myo-inositol-1(or 4)-monophosphatase.
 
     0.422
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.