STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC41012.1Listeria/Bacterioides repeat-containing protein/gliding motility-associated C-terminal domain-containing protein. (1647 aa)    
Predicted Functional Partners:
SKC39370.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
    
  0.734
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.730
SKC87056.1
MFS transporter, UMF1 family.
  
  
  0.510
SKC41018.1
Cystathionine gamma-lyase.
       0.495
SKC45065.1
Cytidine deaminase.
    
  0.465
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase.
    
  0.459
SKC71945.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
  
  
  0.452
SKC74058.1
Uridine kinase.
    
  0.449
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.446
SKC39081.1
Uracil phosphoribosyltransferase.
    
  0.442
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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