STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC41818.1Conserved hypothetical protein. (349 aa)    
Predicted Functional Partners:
SKC41808.1
PAP2 superfamily protein.
 
     0.763
SKC86759.1
Beta-carotene 3-hydroxylase.
     
 0.513
SKC87513.1
Acyl transferase domain-containing protein.
  
  
 0.478
SKC61655.1
Protein of unknown function (DU1801).
  
     0.475
SKC86600.1
Fatty acid desaturase.
 
  
  0.425
SKC77540.1
linoleoyl-CoA desaturase.
 
  
  0.422
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
  
 
 0.419
SKC86922.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
 
 0.419
SKC86678.1
linoleoyl-CoA desaturase.
 
  
  0.413
SKC81868.1
linoleoyl-CoA desaturase.
 
  
  0.405
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.