STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC42757.1Signal transduction histidine kinase. (1379 aa)    
Predicted Functional Partners:
SKC54728.1
PAS domain S-box-containing protein.
 
0.999
SKC57922.1
Signal transduction histidine kinase.
  
0.999
SKC57929.1
Hypothetical protein; Partial gene; manually curated.
  
 0.999
SKC60669.1
PAS domain S-box-containing protein.
 
0.999
SKC38601.1
Signal transduction histidine kinase.
 
0.998
SKC54702.1
Hypothetical protein.
  
 0.998
SKC76225.1
Signal transduction histidine kinase.
 
0.998
SKC85941.1
Signal transduction histidine kinase.
  
0.998
SKC87092.1
Signal transduction histidine kinase.
  
0.998
SKC55283.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
0.997
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.