STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC43565.1Threonine dehydrogenase. (390 aa)    
Predicted Functional Partners:
SKC43559.1
Uncharacterized membrane protein.
 
    0.943
SKC43571.1
Mn-containing catalase.
 
     0.832
SKC43586.1
Quinoprotein glucose dehydrogenase.
  
 
 0.828
SKC57610.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
 0.794
SKC59197.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.794
SKC76230.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.794
SKC41354.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.778
SKC57754.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.778
SKC87513.1
Acyl transferase domain-containing protein.
  
 
 0.759
SKC85930.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.721
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.