STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC45873.1Peptidase_C39 like family protein. (214 aa)    
Predicted Functional Partners:
SKC45878.1
Hypothetical protein.
       0.727
SKC45881.1
Hypothetical protein.
       0.684
SKC40870.1
Fructan beta-fructosidase; Belongs to the glycosyl hydrolase 32 family.
     
 0.509
SKC54481.1
Alpha-galactosidase.
     
 0.484
SKC55053.1
Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family.
     
 0.479
SKC41516.1
Beta-lactamase class A.
    
  0.475
SKC51732.1
Beta-lactamase class A.
    
  0.475
SKC85756.1
Beta-lactamase class A.
    
  0.475
SKC61336.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
   
 
  0.460
SKC62074.1
Glucokinase.
   
 
  0.460
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.