STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC45887.1Hypothetical protein. (526 aa)    
Predicted Functional Partners:
SKC39370.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
 
  0.970
SKC77378.1
TfoX N-terminal domain-containing protein.
    
   0.960
SKC60770.1
Bifunctional NMN adenylyltransferase/nudix hydrolase.
  
 
 0.950
SKC89028.1
Hypothetical protein.
    
 0.936
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 0.900
SKC84181.1
Hypothetical chaperone protein.
    
 0.900
SKC38848.1
Glutamate dehydrogenase/leucine dehydrogenase.
    
 0.898
SKC76699.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.898
SKC56158.1
acetoacetyl-CoA synthetase.
    
 0.857
SKC74264.1
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
    
 0.857
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.