STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC46539.1Protein of unknown function. (281 aa)    
Predicted Functional Partners:
SKC46528.1
Hypothetical protein.
 
     0.950
SKC46549.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
     0.950
SKC46511.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
     0.943
SKC46556.1
Uncharacterized membrane protein YckC, RDD family.
 
     0.903
SKC73152.1
Hypothetical protein.
 
     0.789
SKC73139.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
     0.788
SKC73163.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
     0.787
SKC73131.1
Uncharacterized membrane protein YckC, RDD family.
 
     0.786
SKC46520.1
MoxR-like ATPase.
  
    0.773
SKC73142.1
Hypothetical protein.
 
    0.649
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.