STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC46673.1Hypothetical protein. (321 aa)    
Predicted Functional Partners:
SKC46669.1
3-methyladenine DNA glycosylase AlkD.
       0.768
SKC89672.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
 
   0.638
SKC40193.1
Sensor domain CHASE2-containing protein.
  
     0.587
SKC85017.1
CHASE2 domain-containing protein.
  
     0.534
SKC46678.1
Carboxyl-terminal processing protease.
       0.529
SKC45035.1
PAS domain S-box-containing protein.
  
 
   0.519
SKC55304.1
Response regulator receiver domain-containing protein.
  
 
   0.519
SKC49617.1
Tetratricopeptide repeat-containing protein.
  
     0.513
SKC58895.1
Response regulator receiver domain-containing protein.
  
     0.512
SKC45419.1
Response regulator receiver domain-containing protein.
  
     0.506
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.