STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC47346.1Hypothetical protein. (194 aa)    
Predicted Functional Partners:
SKC47355.1
Hypothetical protein.
       0.787
SKC47361.1
Hypothetical protein.
       0.639
SKC47366.1
Hypothetical protein.
       0.639
SKC47314.1
Hypothetical protein.
       0.590
SKC47305.1
Hypothetical protein.
       0.569
SKC47285.1
Hypothetical protein.
       0.568
SKC47295.1
Hypothetical protein.
       0.568
SKC47278.1
Hypothetical protein.
       0.540
SKC47267.1
Hypothetical protein.
       0.533
SKC47209.1
Predicted Peptidoglycan domain-containing protein.
       0.498
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.