STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrBPeptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. (177 aa)    
Predicted Functional Partners:
SKC71764.1
Peroxiredoxin.
  
 0.999
SKC74601.1
AhpC/TSA family protein.
   
 0.999
SKC84189.1
AhpC/TSA family protein.
   
 0.999
SKC85047.1
Thiol-disulfide isomerase or thioredoxin.
   
 0.999
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.992
SKC42631.1
Disulphide bond corrector protein DsbC.
   
 
 0.991
SKC74409.1
Thiol:disulfide interchange protein DsbD.
   
 
 0.991
SKC81911.1
Thiol:disulfide interchange protein DsbD.
   
 
 0.991
rplL
Large subunit ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
   
 
 0.963
rpsP
SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.
   
   0.962
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.