STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC51514.1Por secretion system C-terminal sorting domain-containing protein. (622 aa)    
Predicted Functional Partners:
SKC88676.1
CARDB protein.
  
     0.739
SKC87603.1
DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family.
   
  0.692
SKC82688.1
Hypothetical protein; Manually curated.
  
     0.666
SKC86966.1
Predicted lipoprotein.
  
     0.620
SKC71866.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
  
     0.617
SKC49427.1
Capsule assembly protein Wzi.
  
     0.602
SKC51507.1
Hypothetical protein.
       0.572
SKC51522.1
Hypothetical protein.
    
  0.562
SKC49131.1
WD40-like Beta Propeller Repeat.
 
  0.554
SKC82685.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
  0.550
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.