STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC57110.1Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. (329 aa)    
Predicted Functional Partners:
SKC57106.1
Rhamnogalacturonyl hydrolase YesR.
     0.829
SKC87454.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.643
SKC54221.1
Xylan 1,4-beta-xylosidase.
  
  
  0.559
SKC85797.1
Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family.
 
     0.551
SKC85791.1
Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family.
 
     0.546
SKC57093.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.516
SKC86417.1
Hypothetical protein.
  
     0.502
SKC64879.1
Alpha-L-arabinofuranosidase.
  
  
  0.481
SKC44644.1
Arabinan endo-1,5-alpha-L-arabinosidase.
 
     0.479
SKC87603.1
DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family.
    
  0.476
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.