STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC61595.1Two component transcriptional regulator, LytTR family. (229 aa)    
Predicted Functional Partners:
SKC61589.1
Histidine kinase.
 
  0.957
SKC83852.1
Two component regulator propeller.
  
  0.846
SKC56037.1
Histidine kinase.
  
  0.824
SKC86094.1
Histidine kinase.
  
  0.824
SKC63963.1
Histidine kinase.
  
  0.823
SKC83683.1
Histidine kinase.
  
  0.822
SKC81570.1
Histidine kinase.
  
  0.821
SKC82148.1
Histidine kinase.
  
  0.820
SKC83834.1
Histidine kinase.
  
  0.820
SKC58632.1
GHKL domain-containing protein.
  
  0.819
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.