STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC62425.1Chitinase. (371 aa)    
Predicted Functional Partners:
SKC81303.1
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.978
SKC86302.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 0.965
SKC40357.1
CubicO group peptidase, beta-lactamase class C family.
     
 0.884
SKC56904.1
Hexosaminidase.
 
  
 0.874
SKC46620.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
 
    
0.850
SKC88915.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
 
      0.848
SKC62533.1
Hexosaminidase.
 
  
 0.825
SKC73664.1
Hexosaminidase.
 
  
 0.811
SKC51808.1
Hexosaminidase.
 
  
 0.798
SKC86286.1
Cytochrome c oxidase subunit 3.
    
 0.754
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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