STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC72086.1Histidine kinase. (371 aa)    
Predicted Functional Partners:
SKC72081.1
Two component transcriptional regulator, LytTR family.
  0.948
SKC38601.1
Signal transduction histidine kinase.
 
      0.899
SKC49685.1
Two component transcriptional regulator, LytTR family.
  
  0.829
SKC63956.1
Two component transcriptional regulator, LytTR family.
  
  0.828
SKC86101.1
Two component transcriptional regulator, LytTR family.
  
  0.827
SKC56047.1
Two component transcriptional regulator, LytTR family.
 
  0.825
SKC83679.1
Two component transcriptional regulator, LytTR family.
  
  0.825
SKC64032.1
Two component transcriptional regulator, LytTR family.
  
  0.824
SKC58403.1
Two component transcriptional regulator, LytTR family.
 
  0.823
SKC83789.1
Two component transcriptional regulator, LytTR family.
  
  0.822
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.