STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC73359.1Predicted dehydrogenase. (432 aa)    
Predicted Functional Partners:
SKC73356.1
Protein of unknown function.
 
     0.867
SKC44903.1
Methane oxygenase PmoA.
 
     0.789
SKC77966.1
Sugar phosphate isomerase/epimerase.
  
 
  0.647
SKC61890.1
Sugar phosphate isomerase/epimerase.
  
 
  0.614
SKC75246.1
Protein of unknown function.
  
     0.609
SKC83975.1
Rhamnogalacturonyl hydrolase YesR.
  
  
  0.603
SKC74727.1
Sugar phosphate isomerase/epimerase.
  
 
  0.590
SKC76819.1
PA14 domain-containing protein.
 
     0.589
SKC85783.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.568
SKC88717.1
Protein of unknown function.
 
     0.547
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.