STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC74656.1N-formylglutamate deformylase. (269 aa)    
Predicted Functional Partners:
SKC74661.1
Formimidoylglutamate deiminase.
 
 
 0.988
SKC76914.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.888
hutI
Imidazolonepropionase.
  
 0.850
SKC71790.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
  0.817
SKC74651.1
beta-N-acetylhexosaminidase.
       0.752
SKC74666.1
Putative acetyltransferase.
       0.746
SKC74648.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
       0.711
SKC74642.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
       0.678
SKC57086.1
Regulatory protein, gntR family.
 
 
 0.673
SKC49064.1
Imidazolonepropionase.
  
  
 0.645
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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