STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC76018.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
SKC76024.1
Iron complex outermembrane recepter protein.
 
     0.945
SKC63256.1
Outer membrane protein TolC.
  
     0.651
SKC76029.1
Hypothetical protein.
       0.622
SKC63263.1
Multidrug resistance efflux pump.
  
     0.614
SKC63270.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
  
     0.611
SKC40639.1
Fe(3+) dicitrate transport protein.
  
     0.542
SKC89748.1
Hypothetical protein.
  
     0.522
SKC63285.1
Transcriptional regulator, TetR family.
  
     0.513
SKC49427.1
Capsule assembly protein Wzi.
  
     0.451
SKC88676.1
CARDB protein.
  
     0.445
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.