STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC76706.1linoleoyl-CoA desaturase. (372 aa)    
Predicted Functional Partners:
SKC41354.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.809
SKC57754.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.809
SKC87513.1
Acyl transferase domain-containing protein.
  
 
 0.640
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
  
 
 0.488
SKC75043.1
stearoyl-CoA desaturase (delta-9 desaturase).
  
 0.482
SKC86759.1
Beta-carotene 3-hydroxylase.
  
 
  0.482
SKC54525.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
     
 0.459
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
 0.443
SKC84097.1
Phytoene dehydrogenase-related protein.
 
  
 0.437
SKC76787.1
Ribonucleoside-diphosphate reductase beta chain.
     
 0.415
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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