STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC77334.1ABC-2 type transport system permease protein. (423 aa)    
Predicted Functional Partners:
SKC77338.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.962
SKC77342.1
Butirosin biosynthesis protein H, N-terminal.
 
     0.953
SKC77345.1
Hypothetical protein.
 
     0.953
SKC77320.1
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.934
SKC77327.1
Acyl carrier protein.
 
   
 0.900
SKC77347.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
 
     0.899
SKC77353.1
Hypothetical protein.
 
     0.861
SKC77324.1
3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.797
SKC51450.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
     0.792
SKC51428.1
Outer membrane lipoprotein-sorting protein.
 
     0.781
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.