STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC77752.1DNA-binding transcriptional regulator, MarR family. (143 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.593
SKC74393.1
Glucose/mannose-6-phosphate isomerase.
    
 0.593
SKC84086.1
Osmoprotectant transport system permease protein.
  
  
 0.561
SKC75558.1
Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
  0.551
SKC64687.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
  
     0.549
SKC84046.1
Glyoxalase family protein.
  
 
 0.536
SKC77757.1
Hypothetical protein.
       0.508
SKC53923.1
Chemotaxis protein CheY-P-specific phosphatase CheC.
   
 
 0.474
SKC54327.1
Hypothetical protein.
   
 
 0.474
SKC57922.1
Signal transduction histidine kinase.
  
 
 0.472
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.