STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC78257.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
SKC50080.1
Hypothetical protein.
  
     0.539
SKC78724.1
ABC-2 family transporter protein.
  
     0.535
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
       0.523
SKC78262.1
Hypothetical protein.
       0.493
SKC86530.1
Protein of unknown function.
  
     0.486
SKC74648.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
  
     0.483
SKC85191.1
Hypothetical protein.
  
     0.476
SKC76159.1
Hypothetical protein.
  
     0.474
SKC83060.1
Predicted dehydrogenase.
  
     0.428
SKC52657.1
Gluconate 2-dehydrogenase subunit 3.
  
     0.422
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.