rpsT protein (Ohtaekwangia koreensis) - STRING interaction network

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Score

rpsT

SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. (84 aa)

Predicted Functional Partners:

rplM

0.997

rpmE2

0.997

rpmH

0.997

rpsP

0.997

rpsU

0.997

rpmA

0.997

rplU

0.997

rpmB

0.997

rpsO

0.997

rpsI

0.996

Your Current Organism:

Ohtaekwangia koreensis

NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	SAMN05660236_0280	SAMN05660236_3457	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rplM	rpmA	SAMN05660236_0280	SAMN05660236_3456	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Large subunit ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplM	rpmB	SAMN05660236_0280	SAMN05660236_3498	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplM	rpmE2	SAMN05660236_0280	SAMN05660236_0999	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L31P.	0.997
rplM	rpmH	SAMN05660236_0280	SAMN05660236_2605	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.996
rplM	rpsI	SAMN05660236_0280	SAMN05660236_0281	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	SAMN05660236_0280	SAMN05660236_4090	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.998
rplM	rpsP	SAMN05660236_0280	SAMN05660236_2686	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rplM	rpsT	SAMN05660236_0280	SAMN05660236_3869	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.997
rplM	rpsU	SAMN05660236_0280	SAMN05660236_3249	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Small subunit ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.996
rplU	rplM	SAMN05660236_3457	SAMN05660236_0280	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplU	rpmA	SAMN05660236_3457	SAMN05660236_3456	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Large subunit ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplU	rpmB	SAMN05660236_3457	SAMN05660236_3498	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplU	rpmE2	SAMN05660236_3457	SAMN05660236_0999	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L31P.	0.997
rplU	rpmH	SAMN05660236_3457	SAMN05660236_2605	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.997
rplU	rpsI	SAMN05660236_3457	SAMN05660236_0281	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.997
rplU	rpsO	SAMN05660236_3457	SAMN05660236_4090	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.997
rplU	rpsP	SAMN05660236_3457	SAMN05660236_2686	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rplU	rpsT	SAMN05660236_3457	SAMN05660236_3869	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.997
rplU	rpsU	SAMN05660236_3457	SAMN05660236_3249	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Small subunit ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.996

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