STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC81785.1Putative ABC transport system ATP-binding protein. (252 aa)    
Predicted Functional Partners:
SKC81780.1
Putative ABC transport system permease protein.
  0.996
SKC64190.1
Putative ABC transport system permease protein.
 
 0.994
SKC83675.1
ABC-type antimicrobial peptide transport system, permease component.
 
 0.993
SKC49554.1
Putative ABC transport system permease protein.
 
 0.992
SKC71936.1
Putative ABC transport system permease protein.
 
 0.992
SKC81907.1
Putative ABC transport system permease protein.
 
 0.992
SKC89744.1
Putative ABC transport system permease protein.
 
 0.992
SKC45622.1
Putative ABC transport system permease protein.
  
 0.991
SKC50278.1
Putative ABC transport system permease protein.
  
 0.991
SKC58712.1
Putative ABC transport system permease protein.
  
 0.991
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.