STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC82002.1Putative NADH-flavin reductase. (207 aa)    
Predicted Functional Partners:
SKC81997.1
Uncharacterized membrane protein.
       0.598
SKC78892.1
Hypothetical protein.
   
    0.576
SKC81413.1
Hypothetical protein.
   
    0.576
SKC61469.1
Arginine deiminase.
   
    0.569
SKC41097.1
Putative signal transducing protein.
  
    0.568
SKC40272.1
Putative DNA-binding domain-containing protein.
   
    0.553
SKC82006.1
AraC-type DNA-binding protein.
       0.543
SKC45484.1
Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase.
   
    0.505
SKC81991.1
Cytochrome C oxidase, cbb3-type, subunit III.
       0.501
SKC65465.1
General stress protein 26.
   
    0.489
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.