STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC82316.1Hypothetical protein. (404 aa)    
Predicted Functional Partners:
SKC71790.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
 0.914
SKC82311.1
Histidinol-phosphate aminotransferase.
 
     0.903
SKC57086.1
Regulatory protein, gntR family.
  
     0.667
SKC57058.1
Sugar (pentulose or hexulose) kinase.
 
     0.564
SKC52323.1
Ankyrin repeat-containing protein.
    
 0.497
SKC66626.1
Hypothetical protein.
    
 0.497
SKC82310.1
Hypothetical protein.
       0.473
SKC82308.1
Iron complex outermembrane recepter protein.
       0.456
SKC40695.1
Predicted O-methyltransferase YrrM.
  
     0.419
SKC89373.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
  
  
 0.401
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.