STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC82864.1Type IX secretion system membrane protein, PorP/SprF family. (305 aa)    
Predicted Functional Partners:
SKC82861.1
Gliding motility-associated C-terminal domain-containing protein.
 
     0.931
SKC65455.1
WD40-like Beta Propeller Repeat.
  
     0.772
SKC82514.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.772
SKC44951.1
Outer membrane protein beta-barrel domain-containing protein.
 
   
 0.760
SKC76413.1
Tetratricopeptide repeat-containing protein.
  
   
 0.750
SKC59592.1
Protein of unknown function.
  
     0.736
SKC38759.1
Hypothetical protein.
  
   
 0.720
SKC55848.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.720
SKC75398.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.713
SKC43089.1
Protein of unknown function.
  
     0.710
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.