STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC83558.1Signal transduction histidine kinase. (367 aa)    
Predicted Functional Partners:
SKC58904.1
PAS domain S-box-containing protein.
 
 0.996
SKC57922.1
Signal transduction histidine kinase.
 
 0.994
SKC57929.1
Hypothetical protein; Partial gene; manually curated.
  
 0.993
SKC60669.1
PAS domain S-box-containing protein.
 
0.986
SKC54676.1
PAS domain S-box-containing protein.
  
0.983
SKC54736.1
PAS domain S-box-containing protein.
 
 
  0.880
SKC88457.1
PAS domain S-box-containing protein.
  
 
  0.875
SKC55283.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.867
SKC57610.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
    
  0.867
SKC59197.1
2-oxoisovalerate dehydrogenase E1 component.
    
  0.867
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.