STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC83950.1Alpha-amylase; Manually curated. (435 aa)    
Predicted Functional Partners:
SKC83952.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.956
SKC55047.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.815
SKC55067.1
4-alpha-glucanotransferase/malto- oligosyltrehalose synthase,TIGR02401.
    
  0.766
SKC55091.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
    
 0.752
SKC61966.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
    
 0.752
SKC88343.1
Starch phosphorylase.
 
 
 0.698
SKC61151.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
  
  0.618
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
    
  0.607
SKC73813.1
Starch synthase.
  
 
  0.533
SKC73929.1
Phosphomannomutase.
 
  
  0.519
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.