STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC85027.1Protein of unknown function. (1111 aa)    
Predicted Functional Partners:
SKC85038.1
Type I restriction enzyme M protein.
  
  
 0.919
SKC85025.1
Type I restriction enzyme, R subunit.
  
    0.851
SKC53052.1
Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.
  
    0.835
SKC76914.1
Glutamate synthase (NADPH/NADH) large chain.
  
    0.831
SKC85030.1
Restriction endonuclease S subunit.
  
    0.829
SKC78361.1
Cystathionine beta-synthase.
    
  0.823
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
  0.798
SKC85036.1
TIGR02646 family protein.
       0.789
SKC85033.1
AAA domain-containing protein, putative AbiEii toxin, Type IV TA system.
       0.776
SKC56457.1
Aspartate kinase.
    
  0.730
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.