STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC85160.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
SKC85156.1
Protein of unknown function.
       0.752
SKC85163.1
Protein of unknown function.
       0.752
SKC85166.1
Bacteroides conjugation system ATPase, TraG family.
       0.730
SKC85152.1
Hypothetical protein.
       0.674
SKC85173.1
Hypothetical protein.
       0.561
SKC85175.1
Hypothetical protein.
       0.543
SKC85177.1
Hypothetical protein.
       0.517
SKC85178.1
Hypothetical protein.
       0.484
SKC85179.1
Bacteroides conjugative transposon TraJ protein.
       0.475
SKC85180.1
Bacteroides conjugative transposon TraK protein.
       0.469
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.