STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC85791.1Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family. (349 aa)    
Predicted Functional Partners:
SKC87454.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.902
SKC85787.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     0.888
SKC85793.1
Protein of unknown function.
       0.762
SKC63380.1
Beta-xylosidase.
 
     0.743
SKC85800.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 43 family.
 
    
0.743
SKC85797.1
Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family.
 
    
0.732
SKC84170.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.726
SKC85805.1
BNR repeat-like domain-containing protein.
      0.721
SKC54067.1
Ricin-type beta-trefoil lectin domain-like.
 
     0.711
SKC44644.1
Arabinan endo-1,5-alpha-L-arabinosidase.
 
     0.655
Your Current Organism:
Ohtaekwangia koreensis
NCBI taxonomy Id: 688867
Other names: Bacteroidetes bacterium 3B-2, CCUG 58939, DSM 25262, KCTC 23018, O. koreensis, Ohtaekwangia koreensis Yoon et al. 2011, strain 3B-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.